Added take with nulls.

Author: jorgecarleitao

Cargo.toml

@@ -25,3 +25,7 @@ harness = false
 [[bench]]
 name = "take"
 harness = false
+
+[[bench]]
+name = "take_nulls_bitmap"
+harness = false

README.md

@@ -58,6 +58,13 @@ core_simd_take 2^20 f32 time:   [911.13 us 912.21 us 913.33 us]
 naive_take 2^20 f32     time:   [912.39 us 915.22 us 918.41 us]
 ```
 
+### Nullable take of values (`Bitmap)
+
+```
+core_simd_take_nulls 2^20 f32   time:   [950.40 us 954.08 us 958.88 us]
+naive_take_nulls 2^20 f32       time:   [2.3714 ms 2.3968 ms 2.4296 ms]
+```
+
 ## Bench results on default
 
 Command: 

benches/take_nulls_bitmap.rs

@@ -0,0 +1,40 @@
+use criterion::{criterion_group, criterion_main, Criterion};
+
+use simd_benches::bitmap_ops;
+use simd_benches::take::*;
+
+fn close(l: &[f32], r: &[f32]) {
+    for (l, r) in l.iter().zip(r.iter()) {
+        assert!((l - r).abs() < l * 0.001 || (l.abs() < 0.000001 && r.abs() < 0.000001));
+    }
+}
+
+fn add_benchmark(c: &mut Criterion) {
+    let name = "";
+    (10..=20).step_by(2).for_each(|log2_size| {
+        let size = 2usize.pow(log2_size);
+        let array = (0..size).map(|x| 1.0 + x as f32).collect::<Vec<_>>();
+        let mut mask = vec![0u8; size / 8];
+        // 10% nulls
+        (0..size).for_each(|x| bitmap_ops::set_bit(&mut mask, x, (1 + x) % 10 != 0));
+        let mask = (mask, size);
+        let indices = (0..size).collect::<Vec<_>>();
+        // check that they are equal...
+        close(
+            &core_simd_take_nulls(&array, &indices, &mask),
+            &naive_take_nulls(&array, &indices, &mask),
+        );
+
+        c.bench_function(
+            &format!("core_simd_take_nulls{} 2^{} f32", name, log2_size),
+            |b| b.iter(|| core_simd_take_nulls(&array, &indices, &mask)),
+        );
+        c.bench_function(
+            &format!("naive_take_nulls{} 2^{} f32", name, log2_size),
+            |b| b.iter(|| naive_take_nulls(&array, &indices, &mask)),
+        );
+    });
+}
+
+criterion_group!(benches, add_benchmark);
+criterion_main!(benches);

src/take.rs

@@ -1,25 +1,70 @@
 use core_simd::*;
 
+use super::bitmap_ops::*;
+
 pub fn naive_take(values: &[f32], indices: &[usize]) -> Vec<f32> {
     indices.iter().map(|i| values[*i]).collect()
 }
 
+const LANES: usize = 8;
+const MASK_LANES: usize = 8 / 8;
+
 pub fn core_simd_take(values: &[f32], indices: &[usize]) -> Vec<f32> {
-    let chunks = indices.chunks_exact(8);
+    let chunks = indices.chunks_exact(LANES);
     // todo handle remainder
 
     let mut result = vec![0.0; indices.len()]; // todo: maybeUninit
-    let result_chunks = result.chunks_exact_mut(8);
+    let result_chunks = result.chunks_exact_mut(LANES);
     chunks.zip(result_chunks).for_each(|(chunk, r_chunk)| {
-        let idxs: [usize; 8] = chunk.try_into().unwrap();
+        let idxs: [usize; LANES] = chunk.try_into().unwrap();
         let idxs: usizex8 = usizex8::from_array(idxs);
 
         let r = Simd::gather_or_default(&values, idxs);
-        let r: [f32; 8] = r.to_array();
+        let r: [f32; LANES] = r.to_array();
 
-        let r_chunk: &mut [f32; 8] = r_chunk.try_into().unwrap();
+        let r_chunk: &mut [f32; LANES] = r_chunk.try_into().unwrap();
         *r_chunk = r;
     });
 
     result
 }
+
+type Bitmap = (Vec<u8>, usize);
+
+pub fn naive_take_nulls(values: &[f32], indices: &[usize], mask: &Bitmap) -> Vec<f32> {
+    let mask = (0..mask.1).map(|x| get_bit(&mask.0, x));
+
+    indices
+        .iter()
+        .zip(mask)
+        .map(|(x, m)| if m { values[*x] } else { 0.0f32 })
+        .collect()
+}
+
+pub fn core_simd_take_nulls(values: &[f32], indices: &[usize], mask: &Bitmap) -> Vec<f32> {
+    assert_eq!(mask.1 % 16, 0); // todo: handle remainders
+    let chunks = indices.chunks_exact(LANES);
+    let mask_chunks = mask.0.chunks_exact(MASK_LANES);
+    //let remainder = chunks.remainder();
+    //let mask_remainder = mask_chunks.remainder();
+
+    let mut result = vec![0.0; indices.len()]; // todo: maybeUninit
+    let result_chunks = result.chunks_exact_mut(LANES);
+    chunks
+        .zip(mask_chunks)
+        .zip(result_chunks)
+        .for_each(|((chunk, mask_chunk), r_chunk)| {
+            let idxs: [usize; LANES] = chunk.try_into().unwrap();
+            let idxs: usizex8 = usizex8::from_array(idxs);
+
+            let mask: [u8; MASK_LANES] = mask_chunk.try_into().unwrap();
+            let mask = masksizex8::from_bitmask(mask);
+
+            let r = Simd::gather_select(&values, mask, idxs, Simd::splat(f32::default()));
+            let r: [f32; LANES] = r.to_array();
+
+            let r_chunk: &mut [f32; LANES] = r_chunk.try_into().unwrap();
+            *r_chunk = r;
+        });
+    result
+}