This repository was archived by the owner on Dec 21, 2024. It is now read-only.
This repository was archived by the owner on Dec 21, 2024. It is now read-only.
hMPXV instance #18
Description
The current mpox instance includes all sequences of MPXY and aligns to a non-hMPXV reference genome. The result is that all hMPXV sequences have hundreds of mutations. This is not useful for monitoring the current outbreak.
The solution could be setting up another GenSpectrum+LAPIS instance that uses an hMPXV sequence as a reference. Open question: should the instance be called hMPXV or hMPXV-1?