diff --git a/Processor.php b/Processor.php
index 1b960bd..60a8aeb 100644
--- a/Processor.php
+++ b/Processor.php
@@ -141,12 +141,14 @@ private function getParams(array $expectedParams, array $actualParams)
     {
         // Simply use the expectedParams value as default for the missing params.
         if (!$this->io->isInteractive()) {
-            return array_replace($expectedParams, $actualParams);
+            return array_replace_recursive($expectedParams, $actualParams);
         }
 
         $isStarted = false;
 
-        foreach ($expectedParams as $key => $message) {
+        $diffParams = self::arrayDiffKeyRecursive($expectedParams, $actualParams);
+
+        foreach ($diffParams as $key => $message) {
             if (array_key_exists($key, $actualParams)) {
                 continue;
             }
@@ -159,9 +161,33 @@ private function getParams(array $expectedParams, array $actualParams)
             $default = Inline::dump($message);
             $value = $this->io->ask(sprintf('<question>%s</question> (<comment>%s</comment>): ', $key, $default), $default);
 
-            $actualParams[$key] = Inline::parse($value);
+            if (array_key_exists($key, $actualParams)) {
+                $actualParams[$key] = array_merge($actualParams[$key], Inline::parse($value));
+            } else {
+                $actualParams[$key] = Inline::parse($value);
+            }
         }
 
         return $actualParams;
     }
+
+    /**
+     * Return recursive diff based on keys
+     * @param  array  $arr1 [description]
+     * @param  array  $arr2 [description]
+     * @return [type]       [description]
+     */
+    private static function arrayDiffKeyRecursive(array $arr1, array $arr2)
+    {
+        $diff = array_diff_key($arr1, $arr2);
+        $intersect = array_intersect_key($arr1, $arr2);
+        foreach ($intersect as $k => $v) {
+            if (is_array($arr1[$k]) && is_array($arr2[$k])) {
+                $d = self::arrayDiffKeyRecursive($arr1[$k], $arr2[$k]);
+                if ($d) $diff[$k] = $d;
+            }
+        }
+
+        return $diff;
+    }
 }
diff --git a/Tests/fixtures/testcases/extra_array_keys/dist.yml b/Tests/fixtures/testcases/extra_array_keys/dist.yml
new file mode 100644
index 0000000..2a9c644
--- /dev/null
+++ b/Tests/fixtures/testcases/extra_array_keys/dist.yml
@@ -0,0 +1,12 @@
+parameters:
+    foo: bar
+    bare:
+        foo2: existing_foo2
+        foo3: existing_foo3
+        foo4: existing_foo4
+        foo5:
+            bare2:
+                - bloup
+                - glop
+
+extra_key: a new extra key
diff --git a/Tests/fixtures/testcases/extra_array_keys/existing.yml b/Tests/fixtures/testcases/extra_array_keys/existing.yml
new file mode 100644
index 0000000..97f4210
--- /dev/null
+++ b/Tests/fixtures/testcases/extra_array_keys/existing.yml
@@ -0,0 +1,7 @@
+# This file is auto-generated during the composer install
+parameters:
+    foo: existing_foo
+    bare:
+        foo1: existing_foo1
+        foo3: existing_foo3
+another_key: foo
diff --git a/Tests/fixtures/testcases/extra_array_keys/expected.yml b/Tests/fixtures/testcases/extra_array_keys/expected.yml
new file mode 100644
index 0000000..e7dbd0d
--- /dev/null
+++ b/Tests/fixtures/testcases/extra_array_keys/expected.yml
@@ -0,0 +1,14 @@
+# This file is auto-generated during the composer install
+parameters:
+    foo: existing_foo
+    bare:
+        foo2: existing_foo2
+        foo3: existing_foo3
+        foo4: existing_foo4
+        foo5:
+            bare2:
+                - bloup
+                - glop
+        foo1: existing_foo1
+extra_key: 'a new extra key'
+another_key: foo
diff --git a/Tests/fixtures/testcases/extra_array_keys/setup.yml b/Tests/fixtures/testcases/extra_array_keys/setup.yml
new file mode 100644
index 0000000..726a209
--- /dev/null
+++ b/Tests/fixtures/testcases/extra_array_keys/setup.yml
@@ -0,0 +1 @@
+title: Extra deep array keys and preserve existing values