Fix: pre-commit for local dev

[eexwhyzee]

when starting a fresh virtualenv, pre-commit won't actually get installed after running uv sync since it's not in the the root pyproject.toml:

prime-cli ❯ git commit -m "test commit"
/Users/minh/repos/eexwhyzee/prime-cli/.venv/bin/python3: No module named pre_commit

so this PR just moves (i don't think it actually still needs to be in the packages/prime/pyproject.toml anymore) the pre-commit dependency into the root pyproject.toml to make sure it gets installed when you run uv sync per the README instructions for local development

---

Note

Moves pre-commit from packages/prime dev extras to root pyproject.toml dev-dependencies and updates uv.lock accordingly.

• Workspace / Tooling:
  • Add pre-commit>=3.5.0 to root pyproject.toml under tool.uv.dev-dependencies.
• Package (packages/prime):
  • Remove pre-commit from project.optional-dependencies.dev.
• Lockfile (uv.lock):
  • Add pre-commit to [manifest.dependency-groups.dev].
  • Remove pre-commit entries from [package.optional-dependencies] and [package.metadata.requires-dist].

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