Skip to content

Pending State for Step 'Generate MSAs and templates with MMseqs2' #39

@Zeno-kimono

Description

@Zeno-kimono

Hello developer,

I've encountered an issue where the script gets stuck at the "Generate MSAs and templates with MMseqs2" step. Normally, this process takes around 5–6 minutes, but this time, it has been pending for over 20 minutes. Is that normal? But it just consumes a lot of my Colab compute units.

Here is the output:

PENDING: 0%| | 0/300 [elapsed: 18:44 remaining: ?]ERROR:unifold.colab.mmseqs:Sleeping for 9s. Reason: PENDING

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions