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oscar is now running slurm 20 rather than slurm 17, so bioflows returns this error:
2021-01-16 10:06:23,030: radical.saga.cpi : MainProcess : MainThread : ERROR : NoSuccess: Couldn't get job id from submitted job! sbatch output:
sbatch: unrecognized option '--workdir'
Try "sbatch --help" for more information
Update bioflows so that --workdir is replaced with --chdir (or -D)
see slurm docs for more info:
https://slurm.schedmd.com/archive/slurm-17.02.0/sbatch.html
https://slurm.schedmd.com/sbatch.html