From 110c548f510688344c80dd9c85cbf410caca6944 Mon Sep 17 00:00:00 2001
From: Sachin Jalan <sachinjalan03@gmail.com>
Date: Tue, 18 Jul 2023 15:25:04 +0530
Subject: [PATCH 1/3] utility_funcitons_added

---
 utitlity_functions_benchmarks.py | 48 ++++++++++++++++++++++++++++++++
 1 file changed, 48 insertions(+)
 create mode 100644 utitlity_functions_benchmarks.py

diff --git a/utitlity_functions_benchmarks.py b/utitlity_functions_benchmarks.py
new file mode 100644
index 0000000..1f21012
--- /dev/null
+++ b/utitlity_functions_benchmarks.py
@@ -0,0 +1,48 @@
+import json
+import os
+import tomllib as tl
+
+def entity_sets(input_file_path: str, output_file_path: str):
+    """
+        Creates a json file of entity_sets required by diff-mpm
+    code from the json file of entity_sets of the CB-Geo MPM code.
+
+    Parameters
+    ----------
+    input_file_path : str
+    output_file_path : str
+
+    Returns
+    -------
+    None
+    """
+    if not os.path.exists(input_file_path):
+        raise FileNotFoundError("File does not exist")
+    f = open(input_file_path)
+    data = json.load(f)
+    dictionary = {}
+    dictionary2 = {}
+    for i in data["node_sets"]:
+        dictionary2[i["id"]] = i["set"]
+    dictionary["node_sets"] = dictionary2
+    f.close()
+    json_object = json.dumps(dictionary, indent=4)
+    with open(output_file_path, "w") as outfile:
+        outfile.write(json_object)
+
+
+def particles_txt_to_json(input_file_path: str, output_file_path: str):
+    if not os.path.exists(input_file_path):
+        raise FileNotFoundError("File does not exist")
+    with open(input_file_path, "r") as f:
+        lines = f.readlines()
+
+    data = []
+    for line in lines[1:]:
+        line = line.strip()
+        if line:
+            floats = line.split(" ")
+        data.append([[float(f) for f in floats]])
+
+    with open(output_file_path, "w") as f:
+        json.dump(data, f, indent=2)

From 34633ebfc41754696b2b5e59915c860ea7abc0ad Mon Sep 17 00:00:00 2001
From: Sachin Jalan <sachinjalan03@gmail.com>
Date: Thu, 20 Jul 2023 16:21:36 +0530
Subject: [PATCH 2/3] Changes Implemented

---
 utitlity_functions_benchmarks.py | 8 +++-----
 1 file changed, 3 insertions(+), 5 deletions(-)

diff --git a/utitlity_functions_benchmarks.py b/utitlity_functions_benchmarks.py
index 1f21012..63abcf1 100644
--- a/utitlity_functions_benchmarks.py
+++ b/utitlity_functions_benchmarks.py
@@ -18,17 +18,15 @@ def entity_sets(input_file_path: str, output_file_path: str):
     """
     if not os.path.exists(input_file_path):
         raise FileNotFoundError("File does not exist")
-    f = open(input_file_path)
-    data = json.load(f)
+    with open(input_file_path) as f:
+        data = json.load(f)
     dictionary = {}
     dictionary2 = {}
     for i in data["node_sets"]:
         dictionary2[i["id"]] = i["set"]
     dictionary["node_sets"] = dictionary2
-    f.close()
-    json_object = json.dumps(dictionary, indent=4)
     with open(output_file_path, "w") as outfile:
-        outfile.write(json_object)
+        json.dump(outfile, indent=2)
 
 
 def particles_txt_to_json(input_file_path: str, output_file_path: str):

From d2050fbed8d6432046967234a51c6a162a5a54dc Mon Sep 17 00:00:00 2001
From: Sachin Jalan <sachinjalan03@gmail.com>
Date: Sat, 5 Aug 2023 14:24:04 +0530
Subject: [PATCH 3/3] support for particle_sets added

---
 utitlity_functions_benchmarks.py | 18 ++++++++++++++++++
 1 file changed, 18 insertions(+)

diff --git a/utitlity_functions_benchmarks.py b/utitlity_functions_benchmarks.py
index 63abcf1..626f397 100644
--- a/utitlity_functions_benchmarks.py
+++ b/utitlity_functions_benchmarks.py
@@ -22,6 +22,11 @@ def entity_sets(input_file_path: str, output_file_path: str):
         data = json.load(f)
     dictionary = {}
     dictionary2 = {}
+    if("particle_sets" in data):
+        for i in data["particle_sets"]:
+            dictionary2[i["id"]] = i["set"]
+        dictionary["particle_sets"] = dictionary2
+    dictionary2 = {}
     for i in data["node_sets"]:
         dictionary2[i["id"]] = i["set"]
     dictionary["node_sets"] = dictionary2
@@ -30,6 +35,19 @@ def entity_sets(input_file_path: str, output_file_path: str):
 
 
 def particles_txt_to_json(input_file_path: str, output_file_path: str):
+    """
+        Creates a json file of particles required by diff-mpm
+    code from the txt file of particles of the CB-Geo MPM code.
+
+    Parameters
+    ----------
+    input_file_path : str
+    output_file_path : str
+
+    Returns
+    -------
+    None
+    """
     if not os.path.exists(input_file_path):
         raise FileNotFoundError("File does not exist")
     with open(input_file_path, "r") as f: