From 540db992e740597881abf39ecd5cab193399ea6c Mon Sep 17 00:00:00 2001 From: mite-bot Date: Thu, 1 Jan 2026 08:44:07 +0000 Subject: [PATCH] Contributor submission PcbC --- .../730274e2-e6eb-11f0-a1a9-8218ec668ab3.json | 68 +++++++++++++++++++ 1 file changed, 68 insertions(+) create mode 100644 mite_data/data/730274e2-e6eb-11f0-a1a9-8218ec668ab3.json diff --git a/mite_data/data/730274e2-e6eb-11f0-a1a9-8218ec668ab3.json b/mite_data/data/730274e2-e6eb-11f0-a1a9-8218ec668ab3.json new file mode 100644 index 0000000..37b7ec8 --- /dev/null +++ b/mite_data/data/730274e2-e6eb-11f0-a1a9-8218ec668ab3.json @@ -0,0 +1,68 @@ +{ + "accession": "MITE9999999", + "status": "pending", + "comment": "Substrate ACV is formed by a the trimodular PcbAB NRPS.", + "changelog": [ + { + "version": "1", + "date": "2026-01-01", + "contributors": [ + "AAAAAAAAAAAAAAAAAAAAAAAA" + ], + "reviewers": [ + "BBBBBBBBBBBBBBBBBBBBBBBB" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "PcbC", + "description": "Isopenicillin N synthase", + "references": [ + "doi:10.1038/ncomms15202", + "doi:10.1016/j.fgb.2006.03.001" + ], + "databaseIds": { + "uniprot": "B6HLU0", + "genpept": "ABA70583.1", + "mibig": "BGC0000404" + }, + "cofactors": { + "inorganic": [ + "Fe" + ] + } + }, + "reactions": [ + { + "tailoring": [ + "Cyclization" + ], + "description": "Cyclicizes the amino-adipyl-cysteinyl-valine substrate via condensation in the benzylpencillin pathway.", + "reactionSMARTS": "[#6:1]-[#6:2](\\[#6@:4](-[#6:22](=[#8:24])-[#8:23])-[#7:5]-[#6:6](/[#6@@:8](-[#7:11]-[#6:12](-[#6:14]-[#6:15]-[#6:16]-[#6@@:17](-[#6:19](=[#8:21])-[#8:20])/[#7:18])=[#8:13])-[#6:9]-[#16:10])=[#8:7])-[#6:3]>>[#6:3]-[#6:2]1(-[#16:10]-[#6:9]2-[#7:5](-[#6:6](/[#6@:8]-2-[#7:11]-[#6:12](-[#6:14]-[#6:15]-[#6:16]-[#6@@:17](-[#6:19](=[#8:21])-[#8:20])/[#7:18])=[#8:13])=[#8:7])-[#6@:4]\\1-[#6:22](=[#8:24])-[#8:23])-[#6:1]", + "reactions": [ + { + "substrate": "CC(C)[C@@H](NC(=O)[C@H](CS)NC(=O)CCC[C@H](N)C(=O)O)C(=O)O", + "products": [ + "CC1(C)SC2[C@H](NC(=O)CCC[C@H](N)C(=O)O)C(=O)N2[C@H]1C(=O)O" + ], + "isIntermediate": true, + "description": "Cyclicizes tripeptide N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine to isopenicillin N." + } + ], + "evidence": { + "evidenceCode": [ + "Heterologous expression", + "Site-directed mutagenesis" + ], + "references": [ + "doi:10.1038/ncomms15202" + ] + }, + "databaseIds": { + "rhea": "22428", + "ec": "1.21.3.1" + } + } + ] +} \ No newline at end of file