Improve embedded_deployments.cy.js test issues

[tyatposit]

Problem Statement

The following outstanding issues still exist for this test file:

• There is occasional flake due to some kind of race or other condition when running the test locally several times that could be improved upon.

• The whole test class is currently skipped in CI due to some permissions issues that need to be resolved on the vscode docker image.

Steps to Reproduce

1. Run the embedded deployments test file back to back several times on a local machine until seeing a failure.
2. Remove the skipCI wrapper from the embedded_deployments class.

DEBUGGING NOTE:

• enable the DEBUG_CYPRESS flag in e2e.yaml workflow for extra logging in CI (or rerun the failure with the debug tickbox checked in CI. Then push up a branch.
• Locally we can also set that DEBUG_CYPRESS as an environment variable for the some extra logging as well.

Related: #2707
Related: #2721