x-Dimension of haralick features is not aligned with mask width

[akanksha28pathak]

The error is not consistent across data and occurs only in some cases. The error is basically that x-dimension of haralick features does not matches the mask width. The line at which error occurs is as follows:

Code line in function ‘execute’ of collageradiomics.py
collage_output[mask_min_y:mask_max_y, mask_min_x:mask_max_x, mask_min_z:mask_max_z,:, :] = haralick_features

Image_Mask-files.zip

Example error: ValueError: could not broadcast input array from shape (230,455,1,13,1) into shape (230,460,1,13,1)

I have attached the image file and mask for the corresponding error.

[mohsenhariri]

Could you confirm if your mask is correct?

[akanksha28pathak]

Yes the mask is correct. It is just the boundary of the foreground.