1.0.4

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #131
• Restructure tutorials by @martinkim0 in #133
• Add run notebook workflow by @martinkim0 in #134
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #136
• Install kernel in workflow by @martinkim0 in #135
• Update automated update PR by @martinkim0 in #138
• Add same seed and scvi version to tutorials by @martinkim0 in #140
• Explicitly add notebook paths to workflow by @martinkim0 in #141
• Add workflow to run from branch by @martinkim0 in #143
• Change workflow name by @martinkim0 in #144
• Rerun and refresh peakvi by @martinkim0 in #145
• Update data tutorial by @martinkim0 in #146
• Update and rerun model guides by @martinkim0 in #147
• Update and rerun quick start tutorials by @martinkim0 in #149
• Update and rerun totalvi tutorials by @martinkim0 in #150
• Update and rerun multivi by @martinkim0 in #151
• Update and rerun scrna tutorials by @martinkim0 in #152
• Update and rerun autotune by @martinkim0 in #153
• Update and rerun hub tutorials by @martinkim0 in #154
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #155

Full Changelog: 1.0.2...1.0.4

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #131
• Restructure tutorials by @martinkim0 in #133
• Add run notebook workflow by @martinkim0 in #134
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #136
• Install kernel in workflow by @martinkim0 in #135
• Update automated update PR by @martinkim0 in #138
• Add same seed and scvi version to tutorials by @martinkim0 in #140
• Explicitly add notebook paths to workflow by @martinkim0 in #141
• Add workflow to run from branch by @martinkim0 in #143
• Change workflow name by @martinkim0 in #144
• Rerun and refresh peakvi by @martinkim0 in #145
• Update data tutorial by @martinkim0 in #146
• Update and rerun model guides by @martinkim0 in #147
• Update and rerun quick start tutorials by @martinkim0 in #149
• Update and rerun totalvi tutorials by @martinkim0 in #150
• Update and rerun multivi by @martinkim0 in #151
• Update and rerun scrna tutorials by @martinkim0 in #152
• Update and rerun autotune by @martinkim0 in #153
• Update and rerun hub tutorials by @martinkim0 in #154
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #155

Full Changelog: 1.0.2...1.0.4

1.0.3

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #131
• Restructure tutorials by @martinkim0 in #133
• Add run notebook workflow by @martinkim0 in #134
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #136
• Install kernel in workflow by @martinkim0 in #135
• Update automated update PR by @martinkim0 in #138
• Add same seed and scvi version to tutorials by @martinkim0 in #140
• Explicitly add notebook paths to workflow by @martinkim0 in #141
• Add workflow to run from branch by @martinkim0 in #143
• Change workflow name by @martinkim0 in #144
• Rerun and refresh peakvi by @martinkim0 in #145
• Update data tutorial by @martinkim0 in #146
• Update and rerun model guides by @martinkim0 in #147
• Update and rerun quick start tutorials by @martinkim0 in #149
• Update and rerun totalvi tutorials by @martinkim0 in #150
• Update and rerun multivi by @martinkim0 in #151
• Update and rerun scrna tutorials by @martinkim0 in #152
• Update and rerun autotune by @martinkim0 in #153
• Update and rerun hub tutorials by @martinkim0 in #154
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #155

Full Changelog: 1.0.2...1.0.3

1.0.2

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #127
• Fix scanpy link in api tutorial by @martinkim0 in #128
• Fix link to Ray in autotune tutorial by @martinkim0 in #130

Full Changelog: 1.0.0...1.0.2

1.0.0

What's Changed

• Switch to myst admonitions by @adamgayoso in #109
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #110
• Fix data handling tutorial and rerun by @martinkim0 in #111
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #112
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #113
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #115
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #117
• Copy over issue and pr templates by @martinkim0 in #120
• DE tutorial update by @PierreBoyeau in #118
• Add motif scoring to main scbasset tutorial by @martinkim0 in #125

New Contributors

• @PierreBoyeau made their first contribution in #118

Full Changelog: 0.20.3...1.0.0

0.20.3

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #107
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #108

Full Changelog: 0.20.2...0.20.3

0.20.2

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #105

Full Changelog: 0.20.1...0.20.2

0.20.1

What's Changed

• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #101
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #102

Full Changelog: 0.20.0...0.20.1

0.20.0

What's Changed

• use scib metrics in harmonization tutorial by @adamgayoso in #84
• totalvi using mudata by @adamgayoso in #83
• data loading notebook use mudata by @adamgayoso in #85
• Scbasset tutorial by @adamgayoso in #86
• Hugging Face / scvi-hub tutorials by @watiss in #87
• Pre commit and run on tutorials by @adamgayoso in #89
• Hub tutorial edits by @adamgayoso in #90
• Pre commit hub by @adamgayoso in #91
• More Markdown pre-commit by @adamgayoso in #93
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #94
• Hub tutorial updates by @watiss in #96
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #97
• Add scbasset batch, autotune tutorials by @martinkim0 in #95
• Minification tutorial + rename latent->minify by @watiss in #98
• fix scbasset tutorial by @adamgayoso in #99
• update hlca to use hf by @adamgayoso in #100

New Contributors

• @pre-commit-ci made their first contribution in #94

Full Changelog: 0.19.0...0.20.0

0.19.0

What's Changed

• Tangram tutorial by @adamgayoso in #80

Full Changelog: 0.18.0...0.19.0

0.18.0

What's Changed

• Update PeakVI in R tutorial by @martinkim0 in #79

New Contributors

• @martinkim0 made their first contribution in #79

Full Changelog: 0.17.4...0.18.0