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OpenTargets ontology changed data storage

Status: Open.

#88 In AstraZeneca/KAZU;

· paluchasz opened on Jul 9, 2025

Sort out mypy errors and overrides

Status: Open.

#72 In AstraZeneca/KAZU;

· paluchasz opened on Sep 18, 2024

Protocols should use Ellipsis (...)

Status: Open.

#70 In AstraZeneca/KAZU;

· paluchasz opened on Sep 11, 2024

mention_confidence not available for some namespace type

Status: Open.

#55 In AstraZeneca/KAZU;

· wonjininfo opened on Jul 12, 2024

typing-extension and pydantic version requirements

Status: Open.

#54 In AstraZeneca/KAZU;

· wonjininfo opened on Jul 12, 2024

Add PFAM clans to ontology list

Status: Open.

#43 In AstraZeneca/KAZU;

· RichJackson opened on Jun 10, 2024

check tests don’t clog up DB

Status: Open.

#41 In AstraZeneca/KAZU;

· RichJackson opened on Jun 10, 2024

Consider using a delta when returning search hits

Status: Open.

#40 In AstraZeneca/KAZU;

· RichJackson opened on Jun 10, 2024

improve Xref mappings by using. embedded xref information from ontologies

Status: Open.

#39 In AstraZeneca/KAZU;

· RichJackson opened on Jun 10, 2024

stanza 1.6.0 failing IT on linux

Status: Open.

#38 In AstraZeneca/KAZU;

· RichJackson opened on Jun 10, 2024

turn off hydra output file logging?

Status: Open.

#37 In AstraZeneca/KAZU;

· RichJackson opened on Jun 10, 2024

Transformer matches can be too conservative

Status: Open.

#36 In AstraZeneca/KAZU;

· RichJackson opened on Jun 10, 2024