adding hpg training code (DO NOT MERGE) #25
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This PR adds the slurm sctipt to run multi compartment segmentation training in HPG. Along with this script, please create the following folders in
segmentationschool
directory:TRAINING_data
output
pretrained_model
In addition, also create
slurm_log.out
file (touchslurm_log.out
).Finally, please update user and CODESDIR path.
Singularity container (.sif) is located in /orange/pinaki.sarder/shared_singularity_files.
To pull this branch on your local, run the following on your main branch (
git checkout main
):