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LinkimputeR_accuracy

These scripts are used for the accuracy test of LinkimputeR. Genomic data: Seychelles warbler chromosome 1 Accuracy check method: downsampling the 22 top coverage individuals (coverage over 8*) and impute with other individuals (2006 in total), compare with true dataset and imputed dataset by using imputeqc and bcftools gtcheck

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Test LinkimputeR on Seychelles warbler data

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