Molecule reconstruction.

Reconstructs a single molecule from an ECT using filtered backprojection.

Installation

For managing the dependencies we use uv. To initialize the environment run

uv sync

Run the reconstruction of the molecule.

The file src/datasets/single_molecule.py contains the hard coded 3D coordinates of the single molecule. To run the end to end reconstruction pipeline run the following command in the command line.

uv run main.py