[MAINT] check format 'IntendedFor' fields in json files #408
Conversation
|
It would be good to implement bids-uris in some tooling before we start converting examples or even warning. |
you mean like pybids resolving them for example? In any case fine with me. I will wrap up this PR and we can leave it hanging until we feel like using it (or not): this was not a lot of work anyway. |
Remi-Gau
force-pushed
the
intended_for
branch
from
17d158f to
dbd281e
Compare
=== Do not change lines below ===
{
"chain": [],
"cmd": "python tools/update_intended_for.py",
"exit": 0,
"extra_inputs": [],
"inputs": [],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
Remi-Gau
force-pushed
the
intended_for
branch
from
dbd281e to
c7673e5
Compare
|
ok added a script to maybe help us convert those URI in batches but the diff gets huge because it may alter the formatting of entire json files at times... so may need improvement... |
|
apparently this shows that the new format of URI is not supported for mircroscopy by the current version of the validator: should I open an issue on the validator at least for book keeping? |
yes please, we should support BIDS URIs in all our validators, even the legacy one
agreed |
3 participants
Preferably this should be the non deprecated format: https://bids-specification.readthedocs.io/en/latest/glossary.html#objects.metadata.IntendedFor
So adding a script to check that in CI.