Skip to content
Draft
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion .github/workflows/cloud_tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -33,7 +33,7 @@ jobs:
needs: check-secrets
strategy:
matrix:
java: [ 17 ]
java: [ 21 ]
run_barclay_tests: [true, false]
experimental: [ false ]
fail-fast: false
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ jobs:
runs-on: ubuntu-latest
strategy:
matrix:
java: [ 17 ]
java: [ 21 ]
experimental: [false]
run_barclay_tests: [true, false]
fail-fast: false
Expand Down
4 changes: 2 additions & 2 deletions build.gradle
Original file line number Diff line number Diff line change
Expand Up @@ -70,7 +70,7 @@ dependencies {
implementation 'org.apache.commons:commons-math3:3.6.1'
implementation 'org.apache.commons:commons-collections4:4.4'
implementation 'com.github.samtools:htsjdk:' + htsjdkVersion
implementation 'org.broadinstitute:barclay:5.0.0'
implementation 'org.broadinstitute:barclay:4.1.0-9-g264e876-SNAPSHOT'
implementation 'org.apache.logging.log4j:log4j-api:2.20.0'
implementation 'org.apache.logging.log4j:log4j-core:2.20.0'
implementation 'org.openjdk.nashorn:nashorn-core:15.4'
Expand All @@ -92,7 +92,7 @@ configurations.configureEach {

java {
toolchain {
languageVersion = JavaLanguageVersion.of(17)
languageVersion = JavaLanguageVersion.of(21)
}
withJavadocJar()
withSourcesJar()
Expand Down
1 change: 0 additions & 1 deletion src/test/java/picard/util/GraphUtilsTest.java
Original file line number Diff line number Diff line change
@@ -1,6 +1,5 @@
package picard.util;

;
import org.testng.annotations.Test;

import java.util.Arrays;
Expand Down
1 change: 0 additions & 1 deletion testdata/picard/util/BedToIntervalListTest/simple.bed
Original file line number Diff line number Diff line change
@@ -1,3 +1,2 @@

chr1 100 2000
chr1 3000 4000