Skip to content

move legend to up and fix y-axis inward if using different ymax #1078

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 20 commits into
base: master
Choose a base branch
from
Open

move legend to up and fix y-axis inward if using different ymax #1078

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
20 commits
Select commit Hold shift + click to select a range
db8e849
move legend to up and fix y-axis inward if using different ymax
Jun 30, 2021
30f42e9
autobreakline for title and rotation y label of heatmap
Jul 11, 2023
f1481a4
autobreakline for title and rotation y label of heatmap
Jul 11, 2023
7cacf3c
debug title
Jul 12, 2023
a7059c1
debug title
Jul 12, 2023
23c5e16
small tweak
Jul 12, 2023
1b85c00
hard limit to 15 chars
Oct 2, 2023
e793e48
add --repgrplist option to combine replicates for plotProfile
Nov 22, 2023
f05c5fa
debug --repgrplist if number matching number of samples
Nov 22, 2023
01caa59
debug --repgrplist if number matching number of samples
Nov 22, 2023
4e19dcb
debug --repgrplist if number matching number of samples
Nov 22, 2023
9f423af
Merge branch 'master' into master
xubeisi Nov 22, 2023
630ad06
Merge branch 'deeptools:master' into master
xubeisi May 16, 2025
eb8fa8d
new matplotlib
Sep 24, 2025
6fc9ee0
linter by black
Sep 24, 2025
b0e4707
flake8 lint
Sep 24, 2025
5cf1e39
debug from numpy
Sep 25, 2025
f9f9e3b
pep8
Sep 25, 2025
baea09b
update workflow
Sep 25, 2025
3e15ce3
debug for new deeptools,matplotlib version
Oct 7, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
27 changes: 19 additions & 8 deletions deeptools/cm.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -30,8 +30,7 @@
# OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

from matplotlib import colors, colormaps as mpl_cm

from matplotlib import colors

_rocket_lut = [
[0.01060815, 0.01808215, 0.10018654],
Expand Down Expand Up @@ -289,7 +288,7 @@
[0.97912374, 0.90313207, 0.83979337],
[0.979891, 0.90894778, 0.84827858],
[0.98067764, 0.91476465, 0.85676611],
[0.98137749, 0.92061729, 0.86536915]
[0.98137749, 0.92061729, 0.86536915],
]


Expand Down Expand Up @@ -549,7 +548,7 @@
[0.84857662, 0.9498573, 0.8776059],
[0.8564431, 0.95309792, 0.88414253],
[0.86429066, 0.95635719, 0.89067759],
[0.87218969, 0.95960708, 0.89725384]
[0.87218969, 0.95960708, 0.89725384],
]


Expand Down Expand Up @@ -809,7 +808,7 @@
[0.67000176, 0.23511902, 0.24650278],
[0.66693423, 0.22859879, 0.24124404],
[0.6638441, 0.22201742, 0.2359961],
[0.66080672, 0.21526712, 0.23069468]
[0.66080672, 0.21526712, 0.23069468],
]


Expand Down Expand Up @@ -1069,13 +1068,25 @@
[0.9932672, 0.79848979, 0.63231691],
[0.99535958, 0.80926704, 0.64687278],
[0.99740544, 0.82008078, 0.66150571],
[0.9992197, 0.83100723, 0.6764127]
[0.9992197, 0.83100723, 0.6764127],
]


_luts = [_rocket_lut, _mako_lut, _vlag_lut, _icefire_lut]
_names = ["rocket", "mako", "vlag", "icefire"]


def mycmregister(name, cmap):
import matplotlib

if hasattr(matplotlib.cm, "register_cmap"):
matplotlib.cm.register_cmap(name, cmap)
elif hasattr(matplotlib.colors, "register_cmap"):
matplotlib.colors.register_cmap(name, cmap)
else:
matplotlib.colormaps.register(cmap, name=name)


for _lut, _name in zip(_luts, _names):

_cmap = colors.ListedColormap(_lut, _name)
Expand All @@ -1084,5 +1095,5 @@
_cmap_r = colors.ListedColormap(_lut[::-1], _name + "_r")
locals()[_name + "_r"] = _cmap_r

mpl_cm.register(_cmap, name=_name)
mpl_cm.register(_cmap_r, name=_name + "_r")
mycmregister(_name, _cmap)
mycmregister(_name + "_r", _cmap_r)
Loading