ELIXIR-LU json schemas

This repository stores JSON schemas used for validation of data by ELIXIR-LU tools.

Structure

.
├── elixir-lu-json-schemas              # folder with schemas
│   └── ...
├── README.md
├── setup.py
└── tests                               # folder with tests validating schemas
    ├── data                            # folder with testing datasets
    └── ...

Running tests

1. create Python virtual environment and activate

   python3 -m virtualenv venv
   source venv/bin/activate

2. install dependencies

   pip install .
   

3. call tests

   python -m unittest
   

Bump version

1. Ensure you have no uncommited changes and you are on master branch

   git status
   git checkout master

2. run bump_version.sh script

   chown +x bump_version.sh
   source bump_version.sh

3. Inspect changes and push to remote repository

   git push origin --tag
   git push origin

Acknowledgement

This work was supported by ELIXIR Luxembourg.