Updating workflows/microbiome/mags-building from 0.3 to 0.4 #985
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Closing in favor of #975. |
gxydevbot
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There are new updates, they have been integrated to the PR, check the file diff. |
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Hello! This is an automated update of the following workflow: workflows/microbiome/mags-building. I created this PR because I think one or more of the component tools are out of date, i.e. there is a newer version available on the ToolShed.
By comparing with the latest versions available on the ToolShed, it seems the following tools are outdated:
toolshed.g2.bx.psu.edu/repos/iuc/quast/quast/5.3.0+galaxy0should be updated totoolshed.g2.bx.psu.edu/repos/iuc/quast/quast/5.3.0+galaxy1toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/2.5.3+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/2.5.4+galaxy0toolshed.g2.bx.psu.edu/repos/devteam/samtools_sort/samtools_sort/2.0.5should be updated totoolshed.g2.bx.psu.edu/repos/devteam/samtools_sort/samtools_sort/2.0.7toolshed.g2.bx.psu.edu/repos/iuc/semibin/semibin/2.0.2+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/iuc/semibin/semibin/2.1.0+galaxy0toolshed.g2.bx.psu.edu/repos/iuc/binette/binette/1.1.1+galaxy0should be updated totoolshed.g2.bx.psu.edu/repos/iuc/binette/binette/1.1.2+galaxy0toolshed.g2.bx.psu.edu/repos/iuc/checkm2/checkm2/1.0.2+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/iuc/checkm2/checkm2/1.1.0+galaxy0toolshed.g2.bx.psu.edu/repos/iuc/gtdbtk_classify_wf/gtdbtk_classify_wf/2.4.1+galaxy0should be updated totoolshed.g2.bx.psu.edu/repos/iuc/gtdbtk_classify_wf/gtdbtk_classify_wf/2.5.2+galaxy1toolshed.g2.bx.psu.edu/repos/iuc/checkm_lineage_wf/checkm_lineage_wf/1.2.3+galaxy0should be updated totoolshed.g2.bx.psu.edu/repos/iuc/checkm_lineage_wf/checkm_lineage_wf/1.2.4+galaxy2The workflow release number has been updated from 0.3 to 0.4.
If you want to skip this change, close this PR without deleting the branch. It will be reopened if another change is detected.
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