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dataGenerator updates #26

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06e5081
dataGenerator fixes. updated save dir for skipped samples and made da…
dc-luo Dec 18, 2024
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dc-luo Dec 18, 2024
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2 changes: 1 addition & 1 deletion hippyflow/modeling/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@

from .cMinimization import ConstrainedNSolver

from .dataGenerator import DataGenerator, compress_dataset
from .dataGenerator import DataGenerator, compress_dataset, data_generator_settings

from .controlJacobian import ObservableControlJacobian

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8 changes: 4 additions & 4 deletions hippyflow/modeling/dataGenerator.py
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Expand Up @@ -133,11 +133,11 @@ def generate(self, n_samples, derivatives = (0,0),\
self.u.zero()
print('reset init guess')
self.prior.sample(self.noise,self.m)
print('sampled m', self.m.get_local())
# print('sampled m', self.m.get_local())

if self.control_distribution is not None:
self.control_distribution.sample(self.z)
print('sampled z', self.z.get_local())
# print('sampled z', self.z.get_local())
x = [self.u,self.m,None,self.z]
else:
x = [self.u,self.m,None]
Expand Down Expand Up @@ -234,9 +234,9 @@ def generate(self, n_samples, derivatives = (0,0),\
exceptions_count += 1
if self.settings['save_failed_solves']:
os.makedirs(data_dir+'/skipped/',exist_ok=True)
np.save(data_dir+'skipped/m_sample_'+str(exceptions_count)+'.npy',self.m.get_local())
np.save(data_dir+'/skipped/m_sample_'+str(exceptions_count)+'.npy',self.m.get_local())
if self.z is not None:
np.save(data_dir+'skipped/z_sample_'+str(exceptions_count)+'.npy',self.z.get_local())
np.save(data_dir+'/skipped/z_sample_'+str(exceptions_count)+'.npy',self.z.get_local())
print('Issue perhaps with the forward solve, moving on.')

print(f"Total exceptions: {exceptions_count}")
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