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18 changes: 9 additions & 9 deletions samplesheet/samplesheet_full.csv
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
group,replicate,fastq_1,fastq_2,strandedness
GM12878,1,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603629_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603629_T1_2.fastq.gz,reverse
GM12878,2,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603630_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603630_T1_2.fastq.gz,reverse
K562,1,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603392_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603392_T1_2.fastq.gz,reverse
K562,2,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603393_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX1603393_T1_2.fastq.gz,reverse
MCF7,1,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370490_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370490_T1_2.fastq.gz,reverse
MCF7,2,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370491_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370491_T1_2.fastq.gz,reverse
H1,1,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370468_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370468_T1_2.fastq.gz,reverse
H1,2,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370469_T1_1.fastq.gz,s3://nf-core-awsmegatests/rnaseq/input_data/SRX2370469_T1_2.fastq.gz,reverse
sample,group,replicate,fastq_1,fastq_2,strandedness
GM12878_1,GM12878,1,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603629_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603629_T1_2.fastq.gz,reverse
GM12878_2,GM12878,2,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603630_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603630_T1_2.fastq.gz,reverse
K562_1,K562,1,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603392_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603392_T1_2.fastq.gz,reverse
K562_2,K562,2,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603393_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX1603393_T1_2.fastq.gz,reverse
MCF7_1,MCF7,1,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370490_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370490_T1_2.fastq.gz,reverse
MCF7_2,MCF7,2,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370491_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370491_T1_2.fastq.gz,reverse
H1_1,H1,1,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370468_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370468_T1_2.fastq.gz,reverse
H1_2,H1,2,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370469_T1_1.fastq.gz,https://nf-core-awsmegatests.s3.amazonaws.com/rnaseq/input_data/SRX2370469_T1_2.fastq.gz,reverse