Skip to content

Pull requests: samtools/bcftools

New pull request New
11 Open 326 Closed
11 Open 326 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Make the mpileup BAM_CREF_SKIP filter optional.
#2282 opened Sep 17, 2024 by jkbonfield Loading…
1
Remove the mpileup BAM_CREF_SKIP filter.
#2281 opened Sep 17, 2024 by jkbonfield Loading…
1
2
Check fclose(stdout) at the end of main() [and miscellanea]
#2046 opened Nov 27, 2023 by jmarshall • Draft
average(FORMAT/GQ) for vcfstats
#1941 opened Jun 9, 2023 by lindenb Loading…
1
Support for telomere (POS=0) coordinate
#1875 opened Mar 1, 2023 by pd3 Loading…
New mpileup2 draft (intended for discussions, not ready to merge!)
#1842 opened Jan 3, 2023 by pd3 Loading…
Make --indel-bias more sensitive to indels
#1648 opened Jan 28, 2022 by pd3 Loading…
6
Fix vcf-merge when using COLLAPSE_NONE
#1624 opened Dec 8, 2021 by starskyzheng Loading…
1
Move regidx code to htslib
#865 opened Aug 14, 2018 by pd3 Loading…
plugin: new validate plugin: check GT indexes
#448 opened Jun 21, 2016 by mcshane Loading…
Fix GT splitting in bcftools norm D1: Difficult enhancement P2: Desirable
#344 opened Oct 28, 2015 by jpiper Loading…
6
ProTip! Type g i on any issue or pull request to go back to the issue listing page.