initial attempt at CI build

.github/workflows/ci.yml

@@ -0,0 +1,57 @@
+name: clojure-data-cookbook CI
+
+on: [push]
+
+jobs:
+  build-deploy:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Set up Quarto
+        uses: quarto-dev/quarto-actions/setup@v2
+        with:
+          # To install LaTeX to build PDF book
+          tinytex: true
+          # uncomment below and fill to pin a version
+          # version: SPECIFIC-QUARTO-VERSION-HERE
+
+      - name: Prepare Java
+        uses: actions/setup-java@v3
+        with:
+          distribution: 'temurin'
+          java-version: '17'
+
+      - name: Install Clojure tools
+        uses: DeLaGuardo/[email protected]
+        with:
+          cli: latest              # Clojure CLI based on tools.deps
+
+      # Optional step:
+      - name: Cache Clojure dependencies
+        uses: actions/cache@v3
+        with:
+          path: |
+            ~/.m2/repository
+            ~/.gitlibs
+            ~/.deps.clj
+          # List all files containing dependencies:
+          key: cljdeps-${{ hashFiles('deps.edn') }}
+          restore-keys: cljdeps-
+
+#      - name: Execute tests
+#        run: clojure -M:dev:test
+
+      - name: Prepare dependencies
+        run: clojure -P -Sthreads 1
+
+      - name: Build Markdown
+        run: clojure -M:dev -m scicloj.claykind.main --verbose
+
+      - name: Build the book
+        run: cd book && quarto render
+
+      - name: Deploy
+        if: github.event_name == 'push' && github.ref == 'refs/heads/main'
+        run: cd book && quarto publish gh-pages

.gitignore

@@ -18,4 +18,4 @@ pom.xml.asc
 .dir-locals.el
 
 # ignore built website on main branch, only see on gh-pages
-public/
+public/

book/.gitignore

@@ -1,2 +1,3 @@
 /.quarto/
 /_book/
+/qmd/

book/_quarto.yml

@@ -3,18 +3,21 @@ project:
 
 format:
   html:
-    theme: cosmo
+    theme:
+      light: flatly
+      dark: darkly
 
 book:
   title: "Clojure Data Cookbook"
+  favicon: images/icon.svg
   chapters:
     - index.qmd
     - chapter_1_intro/1_1_welcome.md
     - chapter_1_intro/1_2_why_clojure.md
     - chapter_1_intro/1_3_set_up.md
-    - chapter_2_input_output/2_1_loading_data/index.qmd
-    - chapter_2_input_output/2_2_messy_data/index.qmd
-    - chapter_2_input_output/2_3_exporting_data/index.qmd
-    - chapter_3_data_manipulation/3_data_manipulation/index.qmd
-    - chapter_4_data_visualisation/4_2_graphs/index.qmd
-    - chapter_4_data_visualisation/noj_examples/index.qmd
+    - qmd/2-1-loading-data.md
+    - qmd/2-2-messy-data.md
+    - qmd/2-3-exporting-data.md
+    - qmd/3-data-manipulation.md
+    - qmd/4-2-graphs.md
+    - qmd/noj-examples.md

book/chapter_2_input_output/2_3_exporting_data.clj

@@ -59,8 +59,8 @@
 ;; To do that call
 
 (comment
-  (clerk/build! {:paths "path/to/files..."
-                 :index "book/index.clj"}))
+  (clerk-setup/build! {:paths "path/to/files..."
+                 :index       "book/index.clj"}))
 
 ;; More information in Clerk's docs: https://book.clerk.vision/#static-building
 

book/chapter_4_data_visualisation/4_2_graphs.clj

@@ -2,16 +2,10 @@
 
 (ns chapter-4-data-visualisation.4-2-graphs
   (:require [tablecloth.api :as tc]
-            [aerial.hanami.common :as hc]
             [aerial.hanami.templates :as ht]
             [scicloj.noj.v1.vis.hanami.templates :as vht]
             [scicloj.noj.v1.vis :as vis]
-            [scicloj.noj.v1.stats :as stats]
             [scicloj.noj.v1.datasets :as datasets]
-            [tech.v3.datatype :as dtype]
-            [tech.v3.datatype.functional :as fun]
-            [hiccup.core :as hiccup]
-            [clojure2d.color :as color]
             [tablecloth.api :as tc]
             [scicloj.kind-clerk.api :as kind-clerk]))
 

book/chapter_4_data_visualisation/noj_examples.clj

@@ -19,7 +19,6 @@
 
 (kind-clerk/setup!)
 
-
 ;; ## Raw html
 (-> "<p>Hello, <i>Noj</i>.</p>"
     vis/raw-html)

book/experiments/oct_30.clj → book/experiments/oct_30.clj.bak

@@ -1,13 +1,11 @@
 (ns experiments.oct-30
   (:require [scicloj.clay.v2.api :as clay]
-            [scicloj.kindly.v3.kind :as kind]
+            [scicloj.kindly.v4.kind :as kind]
             [clojure.string :as str]
             [tablecloth.api :as tc]))
 
-
-(clay/start!)
-
 (comment
+  (clay/start!)
   (clay/show-doc! "experiments/oct_30.clj" {:toc? true}))
 
 ;; https://r4ds.had.co.nz/transform.html