Skip to content

[rewrite-Studios] Updated custom environment links #751

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 4 commits into from
Aug 1, 2025

Conversation

justinegeffen
Copy link
Contributor

  • Updated the list of images with URLs
  • Minor fixes to list spacing and punctuation

Copy link

netlify bot commented Jul 31, 2025

Deploy Preview for seqera-docs ready!

Name Link
🔨 Latest commit 769d9f5
🔍 Latest deploy log https://app.netlify.com/projects/seqera-docs/deploys/688cb19280295f0008d32ce7
😎 Deploy Preview https://deploy-preview-751--seqera-docs.netlify.app
📱 Preview on mobile
Toggle QR Code...

QR Code

Use your smartphone camera to open QR code link.

To edit notification comments on pull requests, go to your Netlify project configuration.

Signed-off-by: Justine Geffen <[email protected]>
Copy link
Contributor

@weronikasosnowskaseqera weronikasosnowskaseqera left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

just one doubt

@justinegeffen justinegeffen merged commit 3fc8015 into docs-ent-25.2 Aug 1, 2025
6 checks passed
@justinegeffen justinegeffen deleted the justinegeffen-patch-1 branch August 1, 2025 12:45
justinegeffen added a commit that referenced this pull request Aug 4, 2025
* Create new branch to fix issues

* Add Datasets to audit log table

* Bring Enterprise v25.2 on par to the latest Cloud monitoring docs

* Add missing audit log entry to sidebar

* Revert cloud sidebar update - no need to link to audit log

* [Ent] Data explorer multiple file upload (#683)

Signed-off-by: Justine Geffen <[email protected]>

* Add data-links upload and download operations, improve labels (#693)

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Document launch form URL query parameters support (#692)

* Update aws-cloud.md (#704)

* Update aws-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Create aws-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-cloud/docs/compute-envs/aws-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Update aws-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/compute-envs/aws-cloud.md

Co-authored-by: Chris Hakkaart <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/compute-envs/aws-cloud.md

Co-authored-by: Chris Hakkaart <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/compute-envs/aws-cloud.md

Co-authored-by: Chris Hakkaart <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update aws-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Update aws-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>
Co-authored-by: Chris Hakkaart <[email protected]>

* Added 25.2, removed 23.1, 23.2

Signed-off-by: Justine Geffen <[email protected]>

* Create version-25.2-sidebars.json

Signed-off-by: Justine Geffen <[email protected]>

* Create google-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Update version-25.2-sidebars.json

Signed-off-by: Justine Geffen <[email protected]>

* Fixing broken links

* Removed deprecated CE - Google lifesciences

* Updated sidebar

* Broken links and date format

* Removed life sciences

* Update version-25.2-sidebars.json

Signed-off-by: Justine Geffen <[email protected]>

* Update dashboard.md

Signed-off-by: Justine Geffen <[email protected]>

* Update dashboard.md

Signed-off-by: Justine Geffen <[email protected]>

* Formatting fix

* Added docker in docker section

* updated date format

* Added link

* Add run details updates to 25.2 docs (#725)

* Create run-details.mdx

Signed-off-by: Justine Geffen <[email protected]>

* Delete platform-enterprise_versioned_docs/version-25.2/monitoring/run-details.md

Signed-off-by: Justine Geffen <[email protected]>

* Re-add images to run details page

---------

Signed-off-by: Justine Geffen <[email protected]>
Co-authored-by: Llewellyn vd Berg <[email protected]>

* Add syntax highlighting change to enterprise docs

Signed-off-by: Justine Geffen <[email protected]>

* Fix hardcoded path (#737)

* [PLAT-2107] Secret key rotation docs  (#733)

* Updated Fusion licensing (#717)

* Updated Fusion licensing 

Signed-off-by: Justine Geffen <[email protected]>

* Update fusion_docs/licensing.md

Co-authored-by: Chris Hakkaart <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update licensing.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>
Co-authored-by: Chris Hakkaart <[email protected]>

* Highlight the simplicity of custom Data studios with a diff syntax (#707)

* Add Line highlighting to highlight Studios additions

* style: Switch to highlighting with comments

The docs say:
> Prefer highlighting with comments where you can. By inlining highlight in the code, you don't have to manually count the lines if your code block becomes long. If you add/remove lines, you also don't have to offset your line ranges.

https://docusaurus.io/docs/markdown-features/code-blocks#highlighting-with-comments

* fix: Enhanced line highlighting for better visibility

---------

Co-authored-by: Justine Geffen <[email protected]>

* Updated Fusion licensing (#717)

* Updated Fusion licensing 

Signed-off-by: Justine Geffen <[email protected]>

* Update fusion_docs/licensing.md

Co-authored-by: Chris Hakkaart <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update licensing.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>
Co-authored-by: Chris Hakkaart <[email protected]>

* Highlight the simplicity of custom Data studios with a diff syntax (#707)

* Add Line highlighting to highlight Studios additions

* style: Switch to highlighting with comments

The docs say:
> Prefer highlighting with comments where you can. By inlining highlight in the code, you don't have to manually count the lines if your code block becomes long. If you add/remove lines, you also don't have to offset your line ranges.

https://docusaurus.io/docs/markdown-features/code-blocks#highlighting-with-comments

* fix: Enhanced line highlighting for better visibility

---------

Co-authored-by: Justine Geffen <[email protected]>

* Secret key rotation initial commit

* Update crypto_env.yml

* Secret key rotation description, broken md links

* Update changelog/seqera-enterprise/v24.1.md

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update changelog/seqera-enterprise/v24.1.md

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Add tabs for tower.yml and AWS Param store config

* Fix closing tab

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/overview.mdx

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/overview.mdx

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/overview.mdx

Signed-off-by: Justine Geffen <[email protected]>

* Apply suggestions from code review

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_yml.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_yml.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_yml.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_yml.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_aws.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_aws.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_aws.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_aws.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/configtables/crypto_aws.yml

Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/overview.mdx

Co-authored-by: Justine Geffen <[email protected]>
Signed-off-by: Llewellyn vd Berg <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/configuration/overview.mdx

Co-authored-by: Chris Hakkaart <[email protected]>
Signed-off-by: Llewellyn vd Berg <[email protected]>

* Code review fixes

---------

Signed-off-by: Justine Geffen <[email protected]>
Signed-off-by: Llewellyn vd Berg <[email protected]>
Co-authored-by: Justine Geffen <[email protected]>
Co-authored-by: Chris Hakkaart <[email protected]>
Co-authored-by: Edmund Miller <[email protected]>

* [25.2] Enterprise deployment fresh install content  (#719)

* Update studios.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/studios.md

Signed-off-by: Justine Geffen <[email protected]>

* Update studios.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/studios.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/studios.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/studios.md

Co-authored-by: Llewellyn vd Berg <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Apply suggestions from code review

Co-authored-by: Llewellyn vd Berg <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>
Co-authored-by: Llewellyn vd Berg <[email protected]>

* [25.2] Image versions (#736)

* [25.2] Image versions

Signed-off-by: Justine Geffen <[email protected]>

* Updated image version

---------

Signed-off-by: Justine Geffen <[email protected]>

* [Troubleshooting] Studio stuck in starting update (#744)

* [Troubleshooting] Studio stuck in starting update

Signed-off-by: Justine Geffen <[email protected]>

* Update studios_troubleshooting.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>

* Update managing.md

Signed-off-by: Justine Geffen <[email protected]>

* Update to env vars for 25.2 (#748)

* Update to env vars for 25.2

Signed-off-by: Justine Geffen <[email protected]>

* Update data_features_env.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update aws_parameter_store.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>

* Add path-based routing to Enterprise docs (#735)

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Weronika Sosnowska <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Weronika Sosnowska <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Rob Newman <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Rob Newman <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Rob Newman <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Rob Newman <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Rob Newman <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/studios/overview.md

Co-authored-by: Rob Newman <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>
Co-authored-by: Weronika Sosnowska <[email protected]>
Co-authored-by: Rob Newman <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update aws-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Update google-cloud.md

Signed-off-by: Justine Geffen <[email protected]>

* Update managing.md

Signed-off-by: Justine Geffen <[email protected]>

* 25.2 upgrade steps (#750)

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update installation.mdx

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.mdx

Signed-off-by: Justine Geffen <[email protected]>

* Update installation.mdx

Signed-off-by: Justine Geffen <[email protected]>

* Update installation.md

Signed-off-by: Justine Geffen <[email protected]>

* Update installation.md

Signed-off-by: Justine Geffen <[email protected]>

* Update monitor-runs.md

Signed-off-by: Justine Geffen <[email protected]>

* Update automation.md

Signed-off-by: Justine Geffen <[email protected]>

* Update add-data.md

Signed-off-by: Justine Geffen <[email protected]>

* Update studios.md

Signed-off-by: Justine Geffen <[email protected]>

* Update view-run-information.md

Signed-off-by: Justine Geffen <[email protected]>

* Update proteinfold.md

Signed-off-by: Justine Geffen <[email protected]>

* Update rnaseq.md

Signed-off-by: Justine Geffen <[email protected]>

* Update workspace-setup.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update advanced.md

Signed-off-by: Justine Geffen <[email protected]>

* Update cloud-costs.md

Signed-off-by: Justine Geffen <[email protected]>

* Update dashboard.md

Signed-off-by: Justine Geffen <[email protected]>

* Update overview.md

Signed-off-by: Justine Geffen <[email protected]>

* Update run-details.mdx

Signed-off-by: Justine Geffen <[email protected]>

* [25.2] Changelog (#755)

* [25.2] Changelog

Signed-off-by: Justine Geffen <[email protected]>

* Update v25.2.md

Signed-off-by: Justine Geffen <[email protected]>

* Update v25.2.md

Signed-off-by: Justine Geffen <[email protected]>

* Update v25.2.md

Signed-off-by: Justine Geffen <[email protected]>

* Update v25.2.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>

* [rewrite-Studios] Updated custom environment links (#751)

* [rewrite-Studios] Updated custom environment links

Signed-off-by: Justine Geffen <[email protected]>

* Update studios.md

Signed-off-by: Justine Geffen <[email protected]>

* Update studios.md

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>

* [25.2] Config map update - Studios (#758)

* [25.2] Config map update - Studios

Signed-off-by: Justine Geffen <[email protected]>

* Update docker-compose.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/_templates/docker/docker-compose.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/_templates/docker/docker-compose.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/_templates/docker/tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/_templates/k8s/configmap.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update configmap.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/_templates/docker/tower.env

Co-authored-by: Georgi Hristov <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/_templates/k8s/configmap.yml

Co-authored-by: Georgi Hristov <[email protected]>
Signed-off-by: Justine Geffen <[email protected]>

* Update platform-enterprise_versioned_docs/version-25.2/enterprise/_templates/k8s/configmap.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update configmap.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update configmap.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update configmap.yml

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

* Update tower.env

Signed-off-by: Justine Geffen <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>
Co-authored-by: Georgi Hristov <[email protected]>

---------

Signed-off-by: Justine Geffen <[email protected]>
Signed-off-by: Llewellyn vd Berg <[email protected]>
Co-authored-by: Rob Newman <[email protected]>
Co-authored-by: Llewellyn vd Berg <[email protected]>
Co-authored-by: Chris Hakkaart <[email protected]>
Co-authored-by: Edmund Miller <[email protected]>
Co-authored-by: Weronika Sosnowska <[email protected]>
Co-authored-by: Rob Newman <[email protected]>
Co-authored-by: Georgi Hristov <[email protected]>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
1. Dev/PM/SME Needs a review by a Dev/PM/SME enterprise-25.2
Projects
None yet
Development

Successfully merging this pull request may close these issues.

4 participants