[Feature] Added MCP page to docs

platform-cloud/cloud-sidebar.json

@@ -189,7 +189,8 @@
                 "seqerakit/templates"
               ]
               },
-            "pipeline-actions/overview"
+            "pipeline-actions/overview",
+            "seqera-mcp"
           ]
       },
       {

platform-cloud/docs/seqera-mcp.md

@@ -0,0 +1,127 @@
+---
+title: "Seqera MCP"
+description: "Connect AI assistants to Seqera Platform using the Model Context Protocol"
+date created: "2025-12-12"
+tags: [mcp, integration, mcp-server, ai]
+---
+
+Seqera MCP is a [Model Context Protocol](https://modelcontextprotocol.io/) server that enables AI assistants to interact with the Seqera ecosystem. It provides access to Seqera Platform, Wave containers, nf-core modules, and bioinformatics data resources.
+
+## Features
+
+- **Seqera Platform integration**: Launch, monitor, and manage Nextflow pipelines.
+- **Wave container service**: Create containerized environments with conda/pip packages.
+- **nf-core modules**: Search and execute 1000+ standardized bioinformatics modules.
+
+## Remote server
+
+The hosted Seqera MCP server is available at:
+
+```console
+https://mcp.seqera.io/mcp
+```
+
+## Authentication
+
+Seqera MCP supports two authentication methods:
+
+- **OAuth 2.1** (recommended): Interactive login through Seqera Platform. Your browser opens automatically to authenticate when connecting.
+- **Personal Access Token**: Use your Seqera Platform [access token](https://docs.seqera.io/platform-cloud/credentials/overview) as a Bearer token. Useful for clients that don't support OAuth.
+
+## Client setup
+
+### Claude Code
+
+```bash
+claude mcp add seqera --url https://mcp.seqera.io/mcp
+```
+
+### Claude Desktop
+
+1. Open Claude Desktop settings.
+2. Select **Add connectors**.
+3. Click **Add custom connector**.
+4. Enter the URL: `https://mcp.seqera.io/mcp`.
+5. Select **OAuth** as the authentication method.
+
+### Cursor
+
+Create or edit `~/.cursor/mcp.json`:
+
+```json
+{
+  "mcpServers": {
+    "seqera": {
+      "url": "https://mcp.seqera.io/mcp"
+    }
+  }
+}
+```
+
+Restart Cursor to apply the configuration. On first use, your browser will open for authentication.
+
+### OpenAI Codex
+
+First, enable the MCP client feature in `~/.codex/config.toml`:
+
+```toml
+[features]
+rmcp_client = true
+```
+
+Then add the Seqera MCP server and authenticate:
+
+```bash
+codex mcp add seqera --url https://mcp.seqera.io/mcp
+codex mcp login seqera
+```
+
+### VS Code
+
+Create or edit `~/Library/Application Support/Code/User/mcp.json` (macOS) or `%APPDATA%\Code\User\mcp.json` (Windows):
+
+```json
+{
+  "servers": {
+    "seqera": {
+      "url": "https://mcp.seqera.io/mcp",
+      "type": "http"
+    }
+  }
+}
+```
+### Windsurf
+
+Create or edit `~/.codeium/windsurf/mcp_config.json`:
+
+```json
+{
+  "mcpServers": {
+    "seqera": {
+      "serverUrl": "https://mcp.seqera.io/mcp"
+    }
+  }
+}
+```
+
+### Using Personal Access Token
+
+For clients that don't support OAuth, add your access token as a header:
+
+```json
+{
+  "mcpServers": {
+    "seqera": {
+      "url": "https://mcp.seqera.io/mcp",
+      "headers": {
+        "Authorization": "Bearer <YOUR_ACCESS_TOKEN>"
+      }
+    }
+  }
+}
+```
+
+## Resources
+
+- [Model Context Protocol specification](https://modelcontextprotocol.io/)
+