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  1. single-cell-best-practices single-cell-best-practices Public

    https://www.sc-best-practices.org

    Jupyter Notebook 1k 238

  2. scvelo scvelo Public

    RNA Velocity generalized through dynamical modeling

    Python 470 111

  3. cellrank cellrank Public

    CellRank: dynamics from multi-view single-cell data

    Python 404 51

  4. scarches scarches Public

    Reference mapping for single-cell genomics

    Jupyter Notebook 387 64

  5. scib scib Public

    Benchmarking analysis of data integration tools

    Python 391 73

  6. ehrapy ehrapy Public

    Electronic Health Record Analysis with Python.

    Python 310 36

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